Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854242.1_cds_XP_016512487.1_25127
CDS Infomation

[gene=LOC107829552] [db_xref=GeneID:107829552] [protein=galacturonosyltransferase 8-like] [protein_id=XP_016512487.1] [location=complement(join(11096..12391,13351..13527))] [gbkey=CDS]
Sequence

ATGGCTCTCCGGAGCTCCTACCGAACTCCATTTTCCGATCGGAGCATCGCCGTTTCCGGC
ACCGGAATTCGGCTCACGTTCAAACTCTTCGCCTCTTTTCTTACTGTCTCTGTTTTCCTT
TTATTAGCTCTCTCTTTTCTCTTCACTTCCTCCTCCGATCCTTCCGATCTCTCCGTCGGA
AATTCACATGATTTATATAGAGGTGGATCACTACGAAGATCAGTTTTAGCTTTGAAATCC
GATCCATTGAAGCCGAGGCTTGATCAAATTAAGAAGCAAGCAGATGATCACCGTGCATTG
GCTCTAGCTTATGCTTCCTATGCTCGTAAGCTGAAGCTCGAGAACTCAAAGCTCGTTCGA
GTTTTTGCTGAGTTATCTAGGAACTTTACAGATCTGATTTCAAAACCTTCATACCGCACA
CTGTTTGACTCGGACGGGAACTCTATGAATGAGTCGGTGCTTAGGCAGTTTGAGAAAGAG
GTGAAGGAACGGATTAAAGTCACCCGACAAGTTGTTGCTGAGGCAAAAGAGTCATTTGAT
AATCAATTAAAGATTCAGAAGCTGAAAGACACAATTTTTGCTGTCAATGAGCAGCTAACG
AAGGCGAAGAAGCAAGGTGCTTTCTCGAGCTTGATTGCTGCAAAGTCGATCCCGAAGAGC
GTGCATTGTTTGGCAATGAAGTTAATGGAAGAGCGAATCGCACATCCAGATAAGTATACT
GATGATATGAAGCCTACTCCACCAGAATTCGAGGATCCTAGTCTTTATCATTATGCAATT
TTCTCTGACAATGTGCTTGCTGCTTCAGTTGTGGTGAATTCGGCAGTTAAACACTCAAAA
GACCCATCGAAGCATGTGTTTCATGTGGTGACTGATAAAATGAATCTTGGGGCTATGCAA
GTTATGTTCAAGATGAAAGACTATAATGGAGCTTTTATTGAAGTGAAGTCAGTCGAGGAT
TATAAGTTCCTGAATTCTTCTTATGTTCCAGTACTTAAACAACTTGAATCTGCAAAACTA
CAGCAGTTTTACTTCGAGAATAAGCTCGAGAATGCAACAAAGGATACAACTAATATGAAA
TTCAGGAACCCGAAGTATCTCTCAATATTGAACCACATTAGATTCTATTTACCAGAACTG
TACCCCAAGTTGCATAGAATATTGTTCTTGGATGATGATATAGTTGTTCAGAAGGATTTG
ACAGGTTTATGGAAGATAGATATGGATGGTAAGGTGAATGGAGCTGTGGAGACATGTTTT
GGTTCATTCCATCGTTATGCACAATACATGAATTTCTCACATCCTTTGATCAAGGAGAAG
TTCAACCCCAAAGCTTGTGCATGGGCTTATGGAATGAACTTCTTTGACTTGGATGCTTGG
AGGAGGGAGAAGCTCACTGAGGAATACCATTACTGGCAGAGTCTGGTAAGATTTACTGCC
TCCGTTTCATTTTATGTGACAGTGTTTGACTAG

Peptide Sequence

PEP ID

XP_016512487.1
PEP Infomation

PREDICTED: galacturonosyltransferase 8-like [Nicotiana tabacum]
Sequence

MALRSSYRTPFSDRSIAVSGTGIRLTFKLFASFLTVSVFLLLALSFLFTSSSDPSDLSVG
NSHDLYRGGSLRRSVLALKSDPLKPRLDQIKKQADDHRALALAYASYARKLKLENSKLVR
VFAELSRNFTDLISKPSYRTLFDSDGNSMNESVLRQFEKEVKERIKVTRQVVAEAKESFD
NQLKIQKLKDTIFAVNEQLTKAKKQGAFSSLIAAKSIPKSVHCLAMKLMEERIAHPDKYT
DDMKPTPPEFEDPSLYHYAIFSDNVLAASVVVNSAVKHSKDPSKHVFHVVTDKMNLGAMQ
VMFKMKDYNGAFIEVKSVEDYKFLNSSYVPVLKQLESAKLQQFYFENKLENATKDTTNMK
FRNPKYLSILNHIRFYLPELYPKLHRILFLDDDIVVQKDLTGLWKIDMDGKVNGAVETCF
GSFHRYAQYMNFSHPLIKEKFNPKACAWAYGMNFFDLDAWRREKLTEEYHYWQSLVRFTA
SVSFYVTVFD

Transcript Sequence

Gene sequence data has not been registered.